Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITRAHVNGEAQ
5E0S Chain:H ((7-192))
------MRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITR--------
General information:
TITO was launched using:
RESULT:
Template:
5E0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118556 for 1389 contacts (-85.4/contact) +
2D Compatibility (PS) -20803 + (NN) -9627 + (LL) 964
1D Compatibility (HY) -26000 + (ID) 9300
Total energy: -183322.0 ( -131.98 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_5E0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5E0S-query.scw
PDB file :
Tito_Scwrl_5E0S.pdb
: