Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGMRVYLGADHAGYELKQRIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVADPGSLGIVLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFVTTPWSKAQRHQRRIDILAEYERTHEAPPVPGAPA
2BET Chain:C ((13-170))
--GMRVYLGADHAGYELKQRIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVADPGSLGIVLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALAIVDAFVTTPWSKAQRHQRRIDILAEYERTHEAPPVPGA--
General information:
TITO was launched using:
RESULT:
Template:
2BET.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90840 for 1290 contacts (-70.4/contact) +
2D Compatibility (PS) -17767 + (NN) -15358 + (LL) 184
1D Compatibility (HY) -18000 + (ID) 7900
Total energy: -149681.0 ( -116.03 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_2BET.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BET-query.scw
PDB file :
Tito_Scwrl_2BET.pdb
: