Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEKAPQKSVADFWFDPLCPWCWITSRWILEVAKVRDIEVNFHVMSLAILNENRDDLPEQYREGMARAWGPVRVAIAAEQAHGAKVLDPLYTAMGNRIHNQGNHELDEVITQSLADAGLPAELAKAATSDAYDNALRKSHHAGMDAVGEDVGTPTIHVNGVAFFGPVLSKIPRGEEAGKLWDASVTFASYPHFFELKRTRTEPPQFD
4ZIL Chain:A ((8-207))
-------KSVADFWFDPLCPWCWITSRWILEVAKVRDIEVNFHVMSLAILNENRDDLPEQYREGMARAWGPVRVAIAAEQAHGAKVLDPLYTAMGNRIHNQGNHELDEVITQSLADAGLPAELAKAATSDAYDNALRKSHHAGMDAV---VGTPTIHVNGVAFFGPVLSKIPRGEEAGKLWDASVTFASYPHFFELKRTRTEPPQFD
General information:
TITO was launched using:
RESULT:
Template:
4ZIL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122092 for 1573 contacts (-77.6/contact) +
2D Compatibility (PS) -21124 + (NN) -8489 + (LL) 532
1D Compatibility (HY) -25600 + (ID) 9850
Total energy: -186623.0 ( -118.64 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_4ZIL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZIL-query.scw
PDB file :
Tito_Scwrl_4ZIL.pdb
: