Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDRKPVRGRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSEHAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQVMLVTPQLRAAAQAVRGGA
1EYV Chain:A ((9-139))
--------GRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSEHAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQVM-----------------
General information:
TITO was launched using:
RESULT:
Template:
1EYV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88040 for 1012 contacts (-87.0/contact) +
2D Compatibility (PS) -14269 + (NN) -7534 + (LL) 1884
1D Compatibility (HY) -16800 + (ID) 6550
Total energy: -131309.0 ( -129.75 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_1EYV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EYV-query.scw
PDB file :
Tito_Scwrl_1EYV.pdb
: