Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELIVNVINGPNLGRLGRREPAVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPIATGVIVGLGIQGYLLALRYLAEHVGT
3N76 Chain:A ((3-145))
--ELIVNVINGPNLGRLGRREPAVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPIATGVIVGLGIQGYLLALRYLAEHV--
General information:
TITO was launched using:
RESULT:
Template:
3N76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115370 for 1158 contacts (-99.6/contact) +
2D Compatibility (PS) -16068 + (NN) -6734 + (LL) 60
1D Compatibility (HY) -20000 + (ID) 7150
Total energy: -165262.0 ( -142.71 by residue)
QMean score : 0.680
(partial model without unconserved sides chains):
PDB file :
Tito_3N76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N76-query.scw
PDB file :
Tito_Scwrl_3N76.pdb
: