Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARHLPEHAIVQFVKAICSPMALAS
1XKF Chain:B ((7-129))
MTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARHL--------------------
General information:
TITO was launched using:
RESULT:
Template:
1XKF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81372 for 949 contacts (-85.7/contact) +
2D Compatibility (PS) -13595 + (NN) -7303 + (LL) 1936
1D Compatibility (HY) -16400 + (ID) 6150
Total energy: -122884.0 ( -129.49 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_1XKF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XKF-query.scw
PDB file :
Tito_Scwrl_1XKF.pdb
: