Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLFALTSSDIEASTHQPVTGLHH
4WPY Chain:A ((7-89))
----DHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGKRMLKVSTHDIEAVTHQP------
General information:
TITO was launched using:
RESULT:
Template:
4WPY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14380 for 492 contacts (-29.2/contact) +
2D Compatibility (PS) -8956 + (NN) -4579 + (LL) 492
1D Compatibility (HY) -8400 + (ID) 2300
Total energy: -38123.0 ( -77.49 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_4WPY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WPY-query.scw
PDB file :
Tito_Scwrl_4WPY.pdb
: