Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTRRDLPQSPYLAAVTGRKPSRVPVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVACEITLQPIRRYDVDAAILFSDIVVPLRAAGVDLDIVADVGPVIADPVRTAADVAAMKPLDPQA-IQPVLVAASLLVAELG-DVPLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDAGVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGEHG----VPMTHFGVGTAELLGAMSEAVTAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQGNLDPAVVLAGWPAVERAARAVVDDGRRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLVHSL |
| 4ZR8 Chain:A ((12-358)) | ------LKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAG--LSLCKNTEFACEVTLQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHALLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDGRRIPVIVFTKGGGQWLEPM---ITTG-----ADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYGSAASIEKAVKAMLDDAY--ANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271290 for 3004 contacts (-90.3/contact) +
2D Compatibility (PS) -36173 + (NN) -15764 + (LL) 1168
1D Compatibility (HY) -26400 + (ID) 7350
Total energy: -355809.0 ( -118.45 by residue)
QMean score : 0.530
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