Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVVAVTIFVAAYVLIASDRVNKTMVALTGAAAVVVLPVITSHDIFYSHDTGIDWDVIFLLVGMMIIVGVLRQTGVFEYTAIWAAKRARGSPLRIMILLVLVSALASALLDNVTTVLLIAPVTLLVCDRLNINTT-----SFLMAEVFASNIGGAATLVGDPPNIIVASRAGLTFNDFMLHLTPLVVIVLIALIAVLPRLFGSITVEADRIADVMALDEGEAIRDRGLLVKCGAVLVLVFAAFVAHPVLH-------IQPSLVALLGAGMLIVVSGLTRSEYLSSVEWDTLLFFAGLFIMVGALVKTGVVNDLARAATQLTGG-NIVATAFLILGVSAPISGIIDNIPYVATMTPLVAELVAVMGGQPSTDTPWWALALGADFGGNLTAIGASANVVMLGIARRAGAPISFWEFTRKGAVVTAVSIALAAIYLWLRYFVLLH
4F35 Chain:D ((33-449))--VLGISMLAFIAVLWLTEALHVTVTAILVPVMAVFFGIFETQAAL-N---NFANSIIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQGKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLSKVDADKQRSTYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLL---------------------VNWDKGKVVTLGIFGLTVFLWIFSSPINAALGGFKSFDTLVALGAILMLSFARVVHWKEIQKTADWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSHMGIFVVILVVATFVVFLTEFASNTASAALLIPVFATVAEAFG-M-SPVLLSVLIAVAA-SCAFMLPVATPPNAIVFAS-----GHIKQSEMMRVGLYLNIACIGLLTAIAMLFWQ----


General information:
TITO was launched using:
RESULT:

Template: 4F35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -472526 for 3526 contacts (-134.0/contact) +
2D Compatibility (PS) -40883 + (NN) -19141 + (LL) 2424
1D Compatibility (HY) -24400 + (ID) 4300
Total energy: -558826.0 ( -158.49 by residue)
QMean score : 0.325

(partial model without unconserved sides chains):
PDB file : Tito_4F35.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F35-query.scw
PDB file : Tito_Scwrl_4F35.pdb: