Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRPDNEPARLRSVAENLAAEAAAFVRGRRAEVFGISRAGDGDGAVRAKSSPTDPVTVVDTDTERLLRDRLAQLRPGDPILGEEGGGPADVTATPSDRVTWVLDPIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLGAHLTDERGRHVLRCTGVDELSMALLGTGFGYSVRCREKQAELLAHVVPLVRDVRRIGSAALDLCMVAAGRLDAYYEHGVQVWDCAAGALIAAEAGARVLLSTPRAGGAGLVVVAAAPGIADELLAALQRFNGLEPIPD
2Q74 Chain:A ((5-286))
----DNEPARLRSVAENLAAEAAAFVRGRRAEVF-------------------DPVTVVDTDTERLLRDRLAQLRPGDPILGEEG------------RVTWVLDPIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLGAHLTDERGRHVLRCTGVDELSMALLGTGFGYSVRCREKQAELLAHVVPLVRDVRRIGSAALDLCMVAAGRLDAYYEHGVQVWDCAAGALIAAEAGARVLLS------AGLVVVAAAPGIADELLAALQRFNGLE----
General information:
TITO was launched using:
RESULT:
Template:
2Q74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -194664 for 2248 contacts (-86.6/contact) +
2D Compatibility (PS) -26964 + (NN) -16969 + (LL) -260
1D Compatibility (HY) -34000 + (ID) 12250
Total energy: -285107.0 ( -126.83 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_2Q74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q74-query.scw
PDB file :
Tito_Scwrl_2Q74.pdb
: