Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEVVGSLEEALTSPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDETWRGETGEWRFSRSGLRYRLYSYHRS
4KM0 Chain:B ((21-179))
MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEVVGSLEEALTSPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDETWRGETGEWRFSRSGLRYRLYSYHRS
General information:
TITO was launched using:
RESULT:
Template:
4KM0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93194 for 1165 contacts (-80.0/contact) +
2D Compatibility (PS) -17131 + (NN) -7137 + (LL) 0
1D Compatibility (HY) -21200 + (ID) 7950
Total energy: -146612.0 ( -125.85 by residue)
QMean score : 0.917
(partial model without unconserved sides chains):
PDB file :
Tito_4KM0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KM0-query.scw
PDB file :
Tito_Scwrl_4KM0.pdb
: