Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFEWSDTDLMVRDAVRQFIDKEIRPHQDALETGELSPYPIARKLFSQFGLDVLLAESVNQMLDGERAKREKRDSSGSFGLADQASMVAVLVSELAGVSIGLLSTVAVSLGLGAATIMSRGTLAQQERWVPTLVTLEKIAAWAITEPDSGSDAFGGMKTHVTRDGEDYILNGHKTFITNGPYADVLVVYAKLADGEPASDWRNRPVLVFVLDAGMPGLTQGKPFKKMGMMSSPTGELFFDNVRLTPDRLLCAEGDGRDSARANFAVERLGVALMSLGIINECHRLCVDYAKTRTLWGRNIGQFQLIQLKLAKMEVARINVQNMVFQAIERLKAGKQLTLAEASAIKLYSSEAATDVAMEAVQLFGGNGYMAEYRVEQLARDAKSLMIYAGSNEVQVTHIAKGLLGEPASRA |
2PG0 Chain:A ((8-383)) | -RYLREEHHMFRAAFRKFLEKEAYPHYNDWEKRGIIPR----SFWAKMGENGFLCPWVDEK-------------YGGLN--ADFAYSVVINEELEKVGSSLV-GIGLHNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDL-ANISTTAVKDGDYYIVNGQKTFITNGIHADLIVVACKTDPQAKP---PHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGK-QIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206086 for 3234 contacts (-63.7/contact) +
2D Compatibility (PS) -41165 + (NN) -22766 + (LL) 2044
1D Compatibility (HY) -18000 + (ID) 6450
Total energy: -292423.0 ( -90.42 by residue)
QMean score : 0.460
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