Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAAS--PNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTL-----------SPE-----------DHHALDV---MLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTA---PPSDGRWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGL-YAEPVAVKQGWM-CCIGSSWM-HLSTGVIGPERRYIMVIESLQPADDATARATITQAVRTMFPNGRI |
| 2J9O Chain:A ((11-268)) | -------------------------------------------------------------------LPPERPLTNLQQQIQQLVSRQPNLTAGLYFFNLD--SGASLNVGGDQVFPAASTIKFPILVAFFKAVDEGRVTLQERLTMRPDLIAPEAGTLQYQKPNSQYAALEVAELMITISDNTATNMIIDRLGGAAELNQQFQEWGLENTVINNPEPDMKGTNT-TSPRDLATL--MLKIGQGEILSPRSRDRLLDIMRRTVTNT-------LLPAGLGKGATIAHKTGDIGIVVGDAGMVDMPNG-----QRYVAAMMVKRPYNDPRGSELIRQVSRMVY----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98314 for 1924 contacts (-51.1/contact) +
2D Compatibility (PS) -25037 + (NN) -11915 + (LL) 6408
1D Compatibility (HY) -9200 + (ID) 3350
Total energy: -141408.0 ( -73.50 by residue)
QMean score : 0.487
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