Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAPDVRLTAWVHGWVQGVGFRWWTRCRALELGLTGYAANHADGRVLVVAQGPRAACQKLLQLLQGDTTPGRVAKVVADWSQSTEQITGFSER
4OJ1 Chain:B ((15-99))
------RMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDYSFSEYKGEFEDFE--
General information:
TITO was launched using:
RESULT:
Template:
4OJ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59415 for 641 contacts (-92.7/contact) +
2D Compatibility (PS) -9543 + (NN) -5892 + (LL) 504
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -83646.0 ( -130.49 by residue)
QMean score : 0.714
(partial model without unconserved sides chains):
PDB file :
Tito_4OJ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OJ1-query.scw
PDB file :
Tito_Scwrl_4OJ1.pdb
: