Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKGSMTAHATPNEPDYPPPPGGPPPPADIGRLLLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEGGTFLQRAIFHLPG-LTAAVDELQRDFGST-VADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIANHPDLAAHVRPFGVPFIHIPATRDTRTEAEQRQLQLLS-GNVDLVVLARYMQILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQRARERGVKLIGATAHYVTEVLDEGPIIEQDVVRVDHTHTVDDLVRVGADVERAVLSRAVLWHCQDRVIVHHNQTIVF
3W7B Chain:A ((1-284))
---------------------------MEEARLLVTCPDRPGIVAAVSGFLYAHGANITDLQQHSTDPEGGTFFMRVAFTASHLDL-ARPALERAFQ-EVVASRFQMQWRLAYASERKRTAILVSKPAHALLELLWRYRVGELPMELRLVISNHPDHREEVERFGIPYHHVPVEKGRKEEAEERILALLEAEGVELVVLARYMQILSPGFVERFPMRIINIHHSFLPAFAGADPYRQAYERGVKLIGATAHYVTEELDQGPIIEQDVVRVSHRHSVREMKRLGRELERTVLARAVRWHLEDRILVHENRTVVF
General information:
TITO was launched using:
RESULT:
Template:
3W7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -239468 for 2191 contacts (-109.3/contact) +
2D Compatibility (PS) -29993 + (NN) -12189 + (LL) -1044
1D Compatibility (HY) -29600 + (ID) 8100
Total energy: -320394.0 ( -146.23 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_3W7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W7B-query.scw
PDB file :
Tito_Scwrl_3W7B.pdb
: