Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIQNSSARRRSAGRIVYAAGAVLWR----------PGSADSEG------PVEIAVIHRPRYDDWSLPKGKVDPGETAPVGAVREILEETGHRANLGRRLLTVTYPTDSPFRGVKKVH---YWAARSTGGE--------FTP-----GSEVDELIWLPVPDAMNKLDYAQDRKVLCRFAKH----PADTQTVLVVRHGTAGSKAHFSGDDSKRPLDKRGRAQAEALVPQLLAFGATDVYAADRVRCHQTMEPLAAELNVTIHNEPTLTEESYANNPKRG----RHRVLQIVEQVGTPVICTQGKVIPDLITWWCERDGVHPDKSRNRKGSTWVLSLSAGRLVTADHIGGALAANVRA |
3FJY Chain:A ((5-299)) | ------------------AAGGIVWRWKAGSDIANDPAIASSKSAQEQLDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPYLCEVE--------------HTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSHSTDKDTLAVFVDRVQEGAATAQNLLIVRHAKAESRKSWKGTDANRPITPKGAAMAFALNRELACFNPTRLATSPWLRCQETLQVLSWQTERPMEHINTLTEDAFAEHPAVSWLAFREQITQTLNSRETTAICMHRPVI--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109287 for 1754 contacts (-62.3/contact) +
2D Compatibility (PS) -26030 + (NN) -14253 + (LL) 4424
1D Compatibility (HY) -14800 + (ID) 4300
Total energy: -164246.0 ( -93.64 by residue)
QMean score : 0.449
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