Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEIEAFEGACAYWKPRTLPAP
3H5J Chain:A ((4-171))
SEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLD------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3H5J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150879 for 1396 contacts (-108.1/contact) +
2D Compatibility (PS) -18037 + (NN) -9190 + (LL) 2268
1D Compatibility (HY) -23200 + (ID) 8350
Total energy: -207388.0 ( -148.56 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_3H5J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H5J-query.scw
PDB file :
Tito_Scwrl_3H5J.pdb
: