Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQIMYNYPAMMAHAGDMAGYAGTLQSLGADIASEQAVLSSAWQGDTGITYQGWQTQWNQALEDLVRAYQSMSGTHESNTMAMLARDGAEAAKWGG
2KG7 Chain:B ((602-697))
MSQIMYNYPAMLGHAGDMAGYAGTLQSLGAEIAVEQAALQSAWQGDTGITYQAWQAQWNQAMEDLVRAYHAMSSTHEANTMAMMARDTAEAAKWGG
General information:
TITO was launched using:
RESULT:
Template:
2KG7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10686 for 500 contacts (-21.4/contact) +
2D Compatibility (PS) -10045 + (NN) 266 + (LL) 0
1D Compatibility (HY) -10400 + (ID) 4050
Total energy: -34915.0 ( -69.83 by residue)
QMean score : 0.164
(partial model without unconserved sides chains):
PDB file :
Tito_2KG7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KG7-query.scw
PDB file :
Tito_Scwrl_2KG7.pdb
: