Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATIHPPAYLLDQAKRRFTPSFNNFPGMSLVEHMLLNTKFPEKKLAEPPPGSGLKPVVGDAGLPILGHMIEMLRGGPDYLMFLYKTKGPVVFGDSAVLPGVAALGPDAAQVIYSNRNKDYSQQGWVPVIGPFFH-RGLMLLDFEEHMFHRRIMQEAFVRSRLAGYLEQMDRVVSRVVADDWVVNDARFLVYPAMKALTLDIASMVFMGHEPGTDHELVTKVNKAFTITTRAGNAVIRTSVPPFTWWRGLRARELLENYFTARVKERREA--SGNDLLTVLCQTEDDDGNRFSDADIVNHMIFLMMAAHDTSTSTATTMAYQLAAHPEWQQRCRDESDRHG-DGPLDIESLEQLESLDLVMNESIRLVTPVQWAMRQTVRDTELLGYYLPKGTNVIAYPGMNHRLPEIWTDPLTFDPERFTEPRNEHKRHRYAFTPFGGGVHKCIGMVFDQLEIKTILHRLLRRYRLELSRPDYQPRWDYSAMPIPMDGMPIVLRPR |
2VE3 Chain:A ((9-442)) | ---------------------------------------------------NSLPIPPGDFGLPWLGETLNFLND-GDFGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPL-STRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLE-QWGK-ANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQLFP----WFETYIQGLFS-LPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQ-NLELVVTPSPRPKDNLRVKLHS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256069 for 3556 contacts (-72.0/contact) +
2D Compatibility (PS) -46164 + (NN) -25129 + (LL) 2724
1D Compatibility (HY) -24000 + (ID) 5600
Total energy: -354238.0 ( -99.62 by residue)
QMean score : 0.473
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