Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAGSDRRPRDPAGRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDALREAALAHAANASADLLAQWRSDLDKDRDLAATLARLTTVYLADQDRYRTLNELYMAAAHRPELQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIARLVADGPEQREVGQSAHAGRTPD
3V6G Chain:A ((14-185))
-------------GRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDALREAALAHAANASADLLAQWRSDLDKDRDLAATLARLTTVYLADQDRYRTLNELYMAAAHRPELQRLARLWPDGLLALLEPRIGRRAANAVTVFFDGATLHALITGTPLSTDELTDAIARLVADG-----------------
General information:
TITO was launched using:
RESULT:
Template:
3V6G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105434 for 1281 contacts (-82.3/contact) +
2D Compatibility (PS) -19302 + (NN) -14438 + (LL) 712
1D Compatibility (HY) -20400 + (ID) 8600
Total energy: -167462.0 ( -130.73 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_3V6G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V6G-query.scw
PDB file :
Tito_Scwrl_3V6G.pdb
: