Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTASTALTVAIWIGVMLIGGIGSVLRFLVDRSVARRLARTFPYGTLTVN-----ITGAALLGFLAGLALPKDAALLAGTGFVGAYTTFSTWMLETQRLGEDRQMVSALANIVVSVVLGLAAALLGQWIAQI
5A43 Chain:A ((8-123))
--------------VIIGGSVGCTLRWLLSTKF-NSLFPNLPPGTLVVNLLAGLIIGTMLAYFLRQPHLDPFWKLMITTGLCGGLSTFSTFSVEVFALLQAGNYIWALTSVLVHVIGSLIMTALGFFIITI
General information:
TITO was launched using:
RESULT:
Template:
5A43.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61054 for 688 contacts (-88.7/contact) +
2D Compatibility (PS) -10757 + (NN) -706 + (LL) 1672
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: -73895.0 ( -107.41 by residue)
QMean score : 0.126
(partial model without unconserved sides chains):
PDB file :
Tito_5A43.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5A43-query.scw
PDB file :
Tito_Scwrl_5A43.pdb
: