Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEQEMTEQWLEGCAVQRIMFRDGLVLNFDDYNELVISVPLQLTLPAIETSPAEVVAIDPNDPA-DHERPLFDFAGATCTAFVWYDTGDLHLEFSDGHQIDVHPDDRVTAWELYGKYHGYAACLAPGKLRVVRHDVADANGDQ
4EFF Chain:A ((141-174))
--------------------------------------------------NPKAKVAI--SDPSWENHRALFDMAGFEVVAYPYYD---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4EFF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7746 for 167 contacts (-46.4/contact) +
2D Compatibility (PS) -3619 + (NN) -1953 + (LL) 7048
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -9820.0 ( -58.80 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_4EFF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EFF-query.scw
PDB file :
Tito_Scwrl_4EFF.pdb
: