Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPQMLGPLDEYPLHQLPQPIAWPGSSDRNFYDRSYFNAHDRTGNIFLITGIGY---YPNLGVKDAFVLI---------RRADIQTAVHLSDAIDSDRLHQHVNGYRVEVVEPLRKLRIVLDETEGVAADLTWEGLFDV-VQEQPHVLRSGNRVTLDAQRFAQ-LGTWSGRIVVDGERIAVDPATWLGSRDRSWGIRPVGEPEPAGRPADPPFEGMWWLYVPLAFDDFAVV-LIIQEEPDGFRSLNDCTRIWRDGHVEQLGWPRVRIHYRSGTRIPTGATIEASTPDGAPVHFDVE---SKLAVPTH-VGGGYGGDSDWSHGMWKGEKFVERRTYDMTDPTIIARAGF-GVIDHVGRALCRDGDGNPVQGWGLFEHGALGRHDPSGFADWSTLAP |
| 2ICH Chain:A ((3-330)) | ---LAPVVPGKALEFPQDFGAHNDFRIEWWYVTGWLETPTGKPLGFQITFFRTASHFAPDQLIIAHVALSDPAIGKLQHDQKIARAGFDLAYARTGNTDVKLDDWIFVR-ETDGRYRTRIE-AEDFTLTFILTPSQPLMLQGENGFSRKGPGAPQASYYYSEPHLQVSGIINRQGEDIPVTGTAWL---DREWS----------SEYLDPNAAGWDWISANL--DDGSALMAFQIRGKDDSKIWAYAALRDASGHTRLFTPDQVSFHPIRTWRSA-------RTQAVYPVATRVLTGETEWQITPLMDDQELDSRASAGAVYWEG-------AVTFTRDGQPAGRGYMELTGYV---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ICH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96719 for 2430 contacts (-39.8/contact) +
2D Compatibility (PS) -32519 + (NN) -14049 + (LL) 2772
1D Compatibility (HY) -2800 + (ID) 2550
Total energy: -145865.0 ( -60.03 by residue)
QMean score : 0.255
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