Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDGSVSDIKRGRAARNAKLASIPVGFAGRAALGLGKRLTGKSKDEVTAELMEKAANQLFTVLGELKGGAMKVGQALSVMEAA-IPDEFGEPYREALTKLQKDAPPLPASKVHRVLDGQLGTKWRERFSSFNDTPVASASIGQVHKAIWSDGREVAVKIQYPGADEALRADLKTMQRMVGVLKQLSPGADVQGVVDELVERTEMELDYRLEAANQRAFAKAYHDHPRFQVPHVVA--SAPKVVIQEWIEGVPMAEIIRHGTTEQRDLIGTLLAELTFDAPRRLGLMHGDAHPGNFMLLPD-GRMGIIDFGAVAPMPGGFPIELGMTIRLAREKNYDLLLPTMEKAGLIQRGRQVS--VREIDEMLRQYVEPIQVE-VFHYTRKWLQKMTVSQIDRSVAQIRTARQMDLPAKLAI-PMRVIASVGAILCQLDAHVPIKALSEELIPGFAEPDAIVV |
| 4PED Chain:A ((4-388)) | -----------------------------------------------------ANAERIVRTLCKVRGAALKLGQMLSIQDDAFINP----HLAKIFERVRQSADFMPLKQMMKTLNNDLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARKFRDLLKGHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLS-QEIRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAKSIEMKFLTGY-EVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEK-----IHNLIPVMLRHRLVPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNYCK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16467 for 2861 contacts (5.8/contact) +
2D Compatibility (PS) -36235 + (NN) 3691 + (LL) 4240
1D Compatibility (HY) 15600 + (ID) 1600
Total energy: 2163.0 ( 0.76 by residue)
QMean score : 0.058
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