Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIR--HGDVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPSTRD |
| 1VL0 Chain:A ((12-291)) | ----HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEA----KEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDG-N-NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK-NYGTFHCTCKGICSWYDFAVEIFRLTGIDV-KVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQ-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139016 for 2463 contacts (-56.4/contact) +
2D Compatibility (PS) -31323 + (NN) -19878 + (LL) 940
1D Compatibility (HY) -19600 + (ID) 5150
Total energy: -214027.0 ( -86.90 by residue)
QMean score : 0.530
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