Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAAPTLQTIRLAPKALLHDHLDGGLRPATVLDIAGQVGYDDLPATDVDALASWFRTQSHSGSLERYLEPFSHTVAVMQ-TPEALYRVAFECAQDLAADSVVYAEVRFAPEL------------HISCGLSFDDVVDTVLTGFAAGEKACAADGQPITVRCLVTAMRH-AAMSREIAELAIRFRDKGVVGFDIAGAEAGHPPT---RHLDAFEYMRDHNARFTIHAGEAFGLPSIHEAIAFCGADRLGHGVRIVDDIDVDADGGFQLGRLAAILRDKRIPLELCPSSNVQTGAVASIAEHPFDLLARARFRVTVNTDNRLMSDTSMSLEMHRLVEAFGYGWSDLARFTVNAMKSAFIPFDQRLAIIDEVIKPRFAALMGHSE |
| 1A4M Chain:A ((1-349)) | -------TPAFNKPKVELHVHLDGAIKPETILYFGKKRGIA-LPADTVEELRNIIGMDKPL-SLPGFLAKFDYYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAF-----GIKVRSILCCMRHQPSWSLEVLELCKKYNQKTVVAMDLAGDETIEGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVREAVDILKTERVGHGYHTIED-----------EALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKNDKANYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLPEEEKKELLERLYREYQ-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211603 for 2967 contacts (-71.3/contact) +
2D Compatibility (PS) -35641 + (NN) -11258 + (LL) 1564
1D Compatibility (HY) -22000 + (ID) 5000
Total energy: -283938.0 ( -95.70 by residue)
QMean score : 0.416
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