Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENVSYGLTLCAECAVVCALHSTGGGRLLALACVDGHGSVLMPCGRCRQVLLEHGGSELLIDHPVRPRRLGDLLPDAFGLDDLPRERR
4WIG Chain:A ((3-128))
--DVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVDNVSYGLTLCAECAVVCALHSTGGGRLLALACVDGHGSVLMPCGRCRQVLLEHGGSELLIDHPVRPRRLGDLLPDAFGLDDL-----
General information:
TITO was launched using:
RESULT:
Template:
4WIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85229 for 1000 contacts (-85.2/contact) +
2D Compatibility (PS) -13778 + (NN) -9044 + (LL) 332
1D Compatibility (HY) -19200 + (ID) 6250
Total energy: -133169.0 ( -133.17 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_4WIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WIG-query.scw
PDB file :
Tito_Scwrl_4WIG.pdb
: