Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFA--MANFEPGSNEPTHRVAASTRS--AVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP |
4M1V Chain:A ((148-285)) | ----------------------------------------------------------------------------------------------------TELFTRFLNAK----CTTETGTFAVTTTFANSYSGGLTPTAGAVAATGSQGVMTALNDTTVAEGRITYMSPDFAAPTLAGLDDATKVARVGKG-VANGVAVEGKSPAAANVSAAISVV----PVPAAADR-------TNPDVWVPVFGATTGAG------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4296 for 688 contacts (6.2/contact) +
2D Compatibility (PS) -13921 + (NN) -7894 + (LL) 5112
1D Compatibility (HY) -3200 + (ID) 2000
Total energy: -17607.0 ( -25.59 by residue)
QMean score : 0.065
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