Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDLITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAGLLGTPIGHPAAIALADDAPIITPINSEFGKANRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTENLWALHTNRYDYVTTKPLTAAQRAFRQVFEKPDFRTEHPVVRVHPETGERTLLAGDFVRSFVGLDSHESRVLFEVLQRRITMPENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVISGAPMEIAG
4CVY Chain:A ((5-293))----ITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAGLLGTPI-------------------------NRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTENLWALHTN------------------------DFRTEHPVVRVHPETGERTLLAGDFVRSFVGLDSHESRVLFEVLQRRITMPENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVISGAPMEI--


General information:
TITO was launched using:
RESULT:

Template: 4CVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117077 for 1966 contacts (-59.6/contact) +
2D Compatibility (PS) -26148 + (NN) -13892 + (LL) 3572
1D Compatibility (HY) -32000 + (ID) 12000
Total energy: -197545.0 ( -100.48 by residue)
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_4CVY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CVY-query.scw
PDB file : Tito_Scwrl_4CVY.pdb: