Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALV-HAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDF-AMREHTAMHADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAES-LLDRLINTSHQILMDGPSYRPRKRPGRTTS |
5BQ5 Chain:A ((8-187)) | ---------------------------------------------------------------------RKTIDTFDFTAQPSVDERRIRELLTLSFIDRKENILFLGPPGIGKTHLAISIGMEAI-ARGYKTYFITAHDLVNQLRRADQEGKLEKKLRVFVKPTVLIIDE-MGYLKLDPNSAHYLFQVIARR-YEHAPIILTSNKSFGEWGEIVGDSVLATAML-DRLLHHSIIFNLKGESYRLREKRLQEE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29456 for 1282 contacts (-23.0/contact) +
2D Compatibility (PS) -18087 + (NN) -1586 + (LL) 6528
1D Compatibility (HY) 400 + (ID) 1350
Total energy: -43551.0 ( -33.97 by residue)
QMean score : 0.244
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