Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLSVAPKEIAGHGLLDGKVVVVTAAAGTGIGSATARRALAEGADVVISDHHERRLGETAAELSALGLGRVEHVVCDVTSTAQVDALIDSTTARMGRLDVLVNNAGLGGQTPVADMTDDEWDRVLDVSLTSVFRATRAALRYFRDAPHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAAEYGVRINAVSPSIARHKFLDKTASAELLDRLAAGEAFGRAAEPWEVAATIAFLASDYSSYLTGEVISVSCQHP
3O38 Chain:A ((6-265))
-NLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARH-----------------DEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR-
General information:
TITO was launched using:
RESULT:
Template:
3O38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129435 for 2112 contacts (-61.3/contact) +
2D Compatibility (PS) -26554 + (NN) -6665 + (LL) 1684
1D Compatibility (HY) -27200 + (ID) 10350
Total energy: -198520.0 ( -94.00 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_3O38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O38-query.scw
PDB file :
Tito_Scwrl_3O38.pdb
: