Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNTNPVAAWKALKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHVIDSAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGYVRDVVERVAPSVLLGRRDGLSRVDEFEQRHVHETVAILMARSSAISERIAGGSLAIVGVTYQLDDGRAVLRDHIGNIGEEV
2A5V Chain:B ((8-212))
-PNTNPVAAWKALKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHVIDSAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGYVRDVVERVAPSVLLGRRDGLSRVDEFEQRHVHETVAILMARSSAISERIAGGSLAIVGVTYQLDDGRAVLRDHIGNIGEE-
General information:
TITO was launched using:
RESULT:
Template:
2A5V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152658 for 1709 contacts (-89.3/contact) +
2D Compatibility (PS) -21846 + (NN) -7613 + (LL) 400
1D Compatibility (HY) -27200 + (ID) 10250
Total energy: -219167.0 ( -128.24 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_2A5V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A5V-query.scw
PDB file :
Tito_Scwrl_2A5V.pdb
: