Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPHILPEPSVTGPRHISDTNLLAWYQRSHRDLPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATASTADVLRAWGKLGYPRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACFAYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPEFSVALMELGATVCTARTPRCGLCPLDW-CAWRHAGYPPS--DGPPRRGQAYTGTDRQVRGRLLDVLRAA--------EFPVT-------RAELD------VAWLTDTAQRDRALESLLADALVTRTVDGRFALPGEGF---------------------------- |
| 1RRQ Chain:A ((12-362)) | ------------PAREFQRDLLDWFARERRDLPWRKDR-DPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLVTDDIAKCSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMVKQVPLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMVGLQVELTEPIVSFEHAFSHLVWQLTVFPGRLVHGGPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116832 for 2161 contacts (-54.1/contact) +
2D Compatibility (PS) -31136 + (NN) -15860 + (LL) 552
1D Compatibility (HY) -16400 + (ID) 4500
Total energy: -184176.0 ( -85.23 by residue)
QMean score : 0.349
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