Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQLDSRSASARIRVFDQQRAEAAVRELLYAIGEDPDRDGLVATPSRVARSYREMFAGLYTDPDSVLNTMFDEDHDELVLVKEIPMYSTCEHHLVAFHGVAHVGYIPGDDGRVTGLSKIARLVDLYAKRPQVQERLTSQIADALMKKLDPRGVIVVIEAEHLCMAMRGVRKPGSVTTTSAVRGLFKTNAASRAEALDLILRK
4UQF Chain:A ((4-186))
---------------IDKQKIADAVKVILEAVGENPDREGLIDTPMRVARMYEEVFAGLKKDPSVHFDTIFEEQHEELVLVKDIRFSSMCEHHLVPFFGVAHVAYLP-QNGRVAGLSKLARVVDDVSRRPQLQERITTTVAEIMMEKLKPLGVMVIMEAEHMCMTIRGVNKPGTKTITSAVRGAFKNDDKLRSEVLALI---
General information:
TITO was launched using:
RESULT:
Template:
4UQF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88932 for 1375 contacts (-64.7/contact) +
2D Compatibility (PS) -20528 + (NN) -12263 + (LL) 1468
1D Compatibility (HY) -19600 + (ID) 5250
Total energy: -145105.0 ( -105.53 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_4UQF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UQF-query.scw
PDB file :
Tito_Scwrl_4UQF.pdb
: