Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKAADWVDRAEAEAEVQRSVERFKAGTH
1WCF Chain:A ((10-170))
MQFDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKAADWVDRAEAEAEVQRSVERFKAGT-
General information:
TITO was launched using:
RESULT:
Template:
1WCF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57998 for 1218 contacts (-47.6/contact) +
2D Compatibility (PS) -17645 + (NN) -10806 + (LL) 44
1D Compatibility (HY) -22400 + (ID) 8050
Total energy: -116855.0 ( -95.94 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_1WCF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WCF-query.scw
PDB file :
Tito_Scwrl_1WCF.pdb
: