Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVARHRAQAAADLASLAAAARLPSGLAAACARATLVARAMRVEHAQCRVVDLDVVVTVEVAVAFAGVATATARAGPAKVPTTPG
2YBF Chain:B ((2-22))
---KYRKKHKSEFQLLVDQARKGY------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2YBF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -455 for 75 contacts (-6.1/contact) +
2D Compatibility (PS) -2420 + (NN) -2946 + (LL) 6120
1D Compatibility (HY) -400 + (ID) 200
Total energy: -301.0 ( -4.01 by residue)
QMean score : 0.854
(partial model without unconserved sides chains):
PDB file :
Tito_2YBF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YBF-query.scw
PDB file :
Tito_Scwrl_2YBF.pdb
: