Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------MVYTGSDAGDHASAPQPSGSGSV-PASVNVPGLVVA--AVWAVGLVAGLVALTIGHLAVAAAALVVAVMA----PWCRVAYIAHGQHRVCGETLRGTPAGETASFPTGWRGLRFSTR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4HNE Chain:A ((2-384)) | PLGSPEFAAQAQALAAQAAAAAHAAQAHRERNEFPEDPEFEAVVRQAELAIERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKNEEPYGHLNPKWTKWLQKFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLA-------SETFNYSAIDRVKS-----RGKRLALRFNRIGLPPKVGSFQLFVEGYKDADYWLRRFEAEPLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYDCPPVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDPNFVKDLEEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQMPPVIVET |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HNE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15332 for 468 contacts (-32.8/contact) +
2D Compatibility (PS) -9926 + (NN) -793 + (LL) 412
1D Compatibility (HY) -1200 + (ID) 1300
Total energy: -28139.0 ( -60.13 by residue)
QMean score : 0.162
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