Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPASTSSTGGHALATLLGNHGVEVVVADSIADVEAAARPDSLLLVAQTQYLVDNAL---LDRLAKAPGDLLLVAPT----------SRTRTALTPQLRIAAASPFNS----QPN-CTLREANRAGSVQWG-P---S-DTYQAT------GDLVLTSC---------YGGAL--VRF-RAEGRTITVVGSSNFMTNGGLLPAGNAALAMNLAGNRPRLVWYAPDHIEGEMSSPSSLSDLIPENVHWTIWQLWLVVLLVALWKGRRIGPLVAEELPVVIRASETVEGRGRLYRSRRARDRAADALRTATLQRLRPRLGVGAGAPAPAVVTTIAQRSKADPPFVAYHLFGPAPATDNDLLQLARALDDIERQVTHS |
| 5FMS Chain:A ((21-241)) | ------TNTGTKSLQKRLR-SNWKIQSLKDEITS-EKLIGVKLWITAGPREKFTAAEFEVLKKYLDSGGDILVMLGEGGESRFDTNINFLLEEYGIMVNNDAVVRNVYYKYFHPKEALVSDGVLNREISRAAGKAQALTFVYPFGATLSVMKPAVAVLSTGSVCFPLNRPILAFYHSKNQGFGKLAVLGSCHMFSDQYLDKEENSKIMDVVFQWL--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5FMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68322 for 1129 contacts (-60.5/contact) +
2D Compatibility (PS) -18641 + (NN) -10956 + (LL) 11936
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -91733.0 ( -81.25 by residue)
QMean score : 0.227
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