Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGVLVAAATPIISSASATPANIAGMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQASGTSTNSGYPEHTFTWETGLRLRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNAIVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIMRDQLQASGIPKANYIGQDGLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQGQAR
4LQ6 Chain:A ((3-215))
-------------------------GMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQASGTSTNSGYPEHTFTWETGLRLRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNAIVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIMRDQLQASGIPKANYIGQDGLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQG---
General information:
TITO was launched using:
RESULT:
Template:
4LQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54481 for 1909 contacts (-28.5/contact) +
2D Compatibility (PS) -24136 + (NN) -18017 + (LL) 2636
1D Compatibility (HY) -22800 + (ID) 10650
Total energy: -127448.0 ( -66.76 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_4LQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LQ6-query.scw
PDB file :
Tito_Scwrl_4LQ6.pdb
: