Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVLPACRLGLVVCVATAVITATMVLATPSYACACGAAVTAHGSQATLNHEVALLHWDGTTETIVMQLAMNADTDNVALVVPTPTPAIVTTADQSTFGELDTLSAPLIEHQRHWSLRRGVGASGPQEAAARAPHVLNQVRLGPLEATTLTGGDLSGLQTWLSDNGYAIRPAVSAALDPYVRDGWAFVAIRLTSTDLIVGGLDPVRMTFRSSRLVYPMRLSVAAQEPQHVTIFTLSDHRQQRTDADAATQTTHVRFAGDMSTAVRDPLLRELIGNHGSYLTKVEVDIYQTSRISS-----DFTFGNAPNDD---PYRQVVTVYDDVALPPLLLVVVSAIAVGAAGGAVVVVLRRRRRAHTG |
| 4FNQ Chain:A ((255-304)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNFLAQVEVDQFHTARVSMGINPFDFTWLLQPGESFQTP--EVVMVYSDQGL--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 876 for 125 contacts (7.0/contact) +
2D Compatibility (PS) -4528 + (NN) -1238 + (LL) 22772
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: 12482.0 ( 99.86 by residue)
QMean score : 0.167
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