Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSEQSASIEHVDVLIVGAGISGTGAAYYLKTMQPAKTFAIVEA-----------RYPAIRSDSDLHTFSYEF-----KPWQHEKATASADAIMVHRGRSLAGGDRTLRHRRTRHHELRMVIIGSGATAVTLVPAMAQTAGAVTMPK
4C77 Chain:A ((15-97))
---------EEVDVLVVGAGFSGLYALYRLREL--GRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEIL-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4C77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24702 for 344 contacts (-71.8/contact) +
2D Compatibility (PS) -6830 + (NN) 906 + (LL) 4556
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -33770.0 ( -98.17 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_4C77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C77-query.scw
PDB file :
Tito_Scwrl_4C77.pdb
: