Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKRMVIGLSTGSDDDDVEVIGGVDPRLIAVQENDSDESSLTDLVEQPAKVMRIGTMIKQLLEEVRAAPLDEASRNRLRDIHATSIRELEDGLAPELREELDRLTLPFNEDAVPSDAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLQQMRQGALPPGVGKSGQHGHGTGQYL
5IEU Chain:A ((46-153))
-------------------------------------------------KVMRIGTMIKQLLEEVRAAP----SRNRLRDIHATSIRELEDGLAPELREELDRLTLP-----VPSDAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLQQMRQ---------------------
General information:
TITO was launched using:
RESULT:
Template:
5IEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35270 for 556 contacts (-63.4/contact) +
2D Compatibility (PS) -11106 + (NN) -8598 + (LL) 2784
1D Compatibility (HY) -12800 + (ID) 4950
Total energy: -69940.0 ( -125.79 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_5IEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5IEU-query.scw
PDB file :
Tito_Scwrl_5IEU.pdb
: