Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRIDELRRAEGIDA
3QF3 Chain:B ((3-133))
-STTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRIDELRRAEGIDA
General information:
TITO was launched using:
RESULT:
Template:
3QF3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54595 for 792 contacts (-68.9/contact) +
2D Compatibility (PS) -15083 + (NN) -13251 + (LL) 208
1D Compatibility (HY) -14800 + (ID) 6550
Total energy: -104071.0 ( -131.40 by residue)
QMean score : 0.715
(partial model without unconserved sides chains):
PDB file :
Tito_3QF3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QF3-query.scw
PDB file :
Tito_Scwrl_3QF3.pdb
: