Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDPQDRPDSEPSDASTPPAKKLPAKKAAKKAPARKTPAKKAPAKKTPAKGAKSAPPKPAEAPVSLQQRIETNGQLAAAAKDAAAQAKSTVEGANDALARNASVPAPSHSPVPLIVAVTLSLLALLLIRQLRRR |
2Y9H Chain:E ((85-140)) | -----------------PPKPFHPALKPGQRLRFR---LRANPAKRLAATGKRVALKTPAEKVAWLERRLEEGG------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14747 for 214 contacts (68.9/contact) +
2D Compatibility (PS) -5556 + (NN) 6 + (LL) 5100
1D Compatibility (HY) 0 + (ID) 950
Total energy: 13347.0 ( 62.37 by residue)
QMean score : 0.679
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