Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEQQWNFAGIEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDATATELNNALQNLARTISEAGQAMASTEGNVTGMFA
3FAV Chain:D ((6-83))
------NFAGIEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDATATELNNALQNLARTISEAGQAMA-----------
General information:
TITO was launched using:
RESULT:
Template:
3FAV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10476 for 426 contacts (-24.6/contact) +
2D Compatibility (PS) -8402 + (NN) -1067 + (LL) 1192
1D Compatibility (HY) -7200 + (ID) 3900
Total energy: -29853.0 ( -70.08 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_3FAV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FAV-query.scw
PDB file :
Tito_Scwrl_3FAV.pdb
: