Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN
2L59 Chain:A ((1-116))
MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN
General information:
TITO was launched using:
RESULT:
Template:
2L59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66771 for 860 contacts (-77.6/contact) +
2D Compatibility (PS) -12491 + (NN) -4524 + (LL) 0
1D Compatibility (HY) -16000 + (ID) 5800
Total energy: -105586.0 ( -122.77 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_2L59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L59-query.scw
PDB file :
Tito_Scwrl_2L59.pdb
: