Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLKKTLHLSSLSLASLALSSAALAAAPVMLDQGKEWTESHRQDFYSRDQGSQVMPLPWLKALRQPDGTPFLADSLARYGYLPNPKAPAEGLPVGFTVAGTGARQMVGMTCSACHTRQIEVKGTAYRIDGGPAIVDFQAFLADLDRAVGPLTSDDAAFDAFAKPILGANPPPGARDALLAAVKEWYEPYHTLIERALPKDTWGPARLDAVSMIFNRLTGLDIGTAPPYLIPDNIKAADAPVRYPFLWNAARQNKTQWPGFAANGNDLLGLARNVGEVYG--VFATF------HPQKSKFHLLGMDYLKIN-SA-NFHGLGKLEDLIKKIGPPKWPWA--------VDKHLARKGALIFARKTDEGGCVECHGIRIKDLVLWDTPLRDVGSDSRQHAILDGQVQTGVMEGARMPFGQPLKATDGAFDVLAVAVAGSILQHFVPILGEKHDAKAAAVKPESVMTDETRQLLTAFQKPVRTQADPYPYESRVLQGIWAAAPYLHNGSVPTLEELLKPAAERVESFPVGSAYDVDKVGLAAQQTQFGSYVLKTTGCEQRDSGNSRCGHEYGTSLSAEEKRALLEYLKVL |
3O5C Chain:A ((72-290)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPINSPTVLNADFMLAQFWDGRASNLK-----EQAAGPIANPKEMGFTHELATETIASMPAYRARFAKVYGDEKVDIDRLTDAIAAFEKTLVTPNSPFDQYLLGKQDAISGDAKAGYQLFKD----KGCVSCHNGPAV--G--GTMFMKMGLIKPF-HTN--NP-------------------------------------------------AEGR-----------KGVTGK----D--ADKFVFKVPTLRNIELTYPYFHDGSVWTLEEAVN--------TMA------------------------D-----IQ---------LGQKLTEKETKEMVAFLNSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37181 for 1495 contacts (-24.9/contact) +
2D Compatibility (PS) -20919 + (NN) -11657 + (LL) 20888
1D Compatibility (HY) -800 + (ID) 2150
Total energy: -51819.0 ( -34.66 by residue)
QMean score : 0.145
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