Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMIEGLEKMLAKGVDNALLRFGLGKGYLDAGDAERAAEHLQRCVEQDPKYSAGWKLLGKARQAAGDLAGARQAWEQGLATAATHGDKQAEKEMTVFLRKLDRART
2KAT Chain:A ((4-104))
-ITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLAREDA
General information:
TITO was launched using:
RESULT:
Template:
2KAT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15387 for 715 contacts (-21.5/contact) +
2D Compatibility (PS) -11754 + (NN) -11939 + (LL) 208
1D Compatibility (HY) -6800 + (ID) 2750
Total energy: -48422.0 ( -67.72 by residue)
QMean score : 0.769
(partial model without unconserved sides chains):
PDB file :
Tito_2KAT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KAT-query.scw
PDB file :
Tito_Scwrl_2KAT.pdb
: