Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELR--RQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQ--AWPAWAASQGLAAEALRYGQGFEHLYYLLEAAVAGLGVAIAPEPLVRDDLAAGRLAAPWG-F--IETDARLALWVPARLHDPRAGRLAQWLREQLAG |
3HHG Chain:A ((2-294)) | ----KTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDS-GLRARHLFDSRFRVIASPEYLAKH-GTPQSTEELAGHQCLGFTEPGSLNTWA-VLDAQGNPYKI-SPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140010 for 2113 contacts (-66.3/contact) +
2D Compatibility (PS) -30627 + (NN) -8385 + (LL) 324
1D Compatibility (HY) -11200 + (ID) 3000
Total energy: -192898.0 ( -91.29 by residue)
QMean score : 0.392
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