Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGYWRQRRALGGRRTAVRAPRGRLLLWCAQARRHPLSRRMESSMTLSLDLLLSLCTALAIGLLIGAERGWQERDHEDARQIAGIRTFSLAGLLGGFATLLAGELGSAVWVALLLALAALAVAGY----VSDVRRGGDQGMTTEIALLMTFLLGSLALTEQRLLAAAGGIVL---TLLLSLKDKLHALLKRLTAEELSGTLKLLFISVVLLPVLPNQGYGPWAFFNPYLTWWMVVLIAALGFSAYLAIRLIGSRKGLLLTAVLGGLVSSTVMTLTLARLRERMPDALLACALLATSALMFPRILVEIGAIHPALLKELALPFAATTLVYLGGTLFHALRGGRASQEAPDEPGLRNPFELLPALRFAALLSAILLLVEVGRRLFGDAGIYAVALLSGLADVDAITLSLARAAQGELDPGVASRGIALAALSNSLVKAGLVVLVGGKRLALQTLPFSLAGLLVGALLILL |
3NXS Chain:A ((117-228)) | --------------------------------------------------------------------------HPDAY----IRPSPTSGTLGGVAK------------ATRETIVLLEAAGYDVILVETV--GVGQSEVTVAGMVDTFVFLTLARTGDQLQGIKKGVLELADVIVVNKADGEHAVEAKAAARELSGAIRLIYPRESLWRPPVLTMSAVEGTGLPELWETVLRHREVLEEAGEFEARRRTQQVEWTWSMVRDAVLDRVMNHPEVRRIRDDVEQRVRLGELTPALAAQEILDAAQ------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33209 for 579 contacts (-57.4/contact) +
2D Compatibility (PS) -10908 + (NN) -915 + (LL) 21060
1D Compatibility (HY) -3600 + (ID) 1800
Total energy: -29372.0 ( -50.73 by residue)
QMean score : 0.058
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